LOCUS pTriEx-5 5061 bp DNA circular 1-SEP-2005
DEFINITION pTriEx-5 vector sequence.
SOURCE
ORGANISM
COMMENT VNTNAME|pTriEx-5|
COMMENT VNTREPLTYPE|Plasmid
COMMENT VNTEXTCHREPL|Bacteria
COMMENT VNTEXTCHREPL|Animal/Other Eukaryotic
FEATURES Location/Qualifiers
terminator 2354..2560
/vntifkey="43"
/label=Rabbit\globin\terminator
rep_origin 3540..3540
/vntifkey="33"
/label=ori
misc_recomb 45..306
/vntifkey="86"
/label=Lef2
misc_recomb complement(343..948)
/vntifkey="86"
/label=603\ORF
repeat_unit 950..1008
/vntifkey="35"
/label=Artificial\Direct\Repeat-2
exon 1863..1930
/vntifkey="61"
/label=Exon\3\(Rabbit\Globin)
misc_recomb complement(2624..3329)
/vntifkey="86"
/label=1629
rep_origin 3372..4131
/vntifkey="33"
/label=pUC\ori
CDS complement(4142..4999)
/vntifkey="4"
/label=AmpR
promoter 1021..1597
/vntifkey="29"
/label=CMVie\enhancer/promoter
misc_feature 1129..1147
/vntifkey="21"
/label=Repeat\Element
misc_feature 1070..1087
/vntifkey="21"
/label=Repeat\Element
misc_feature 1264..1282
/vntifkey="21"
/label=Repeat\Element
misc_feature 1321..1338
/vntifkey="21"
/label=Repeat\Element
misc_feature 1426..1442
/vntifkey="21"
/label=Repeat\Element
misc_feature 1451..1469
/vntifkey="21"
/label=Repeat\Element
misc_feature 1489..1506
/vntifkey="21"
/label=Repeat\Element
misc_feature 1526..1543
/vntifkey="21"
/label=Repeat\Element
misc_feature 1579..1584
/vntifkey="21"
/label=Former\SacI
misc_feature 1610..1615
/vntifkey="21"
/label=Former\Hind\III
TATA_signal 1569..1575
/vntifkey="41"
/label=TATA\Box
exon 1598..1698
/vntifkey="61"
/label=Exon\1
misc_feature 1375..1380
/vntifkey="21"
/label=Former\Nco\I
terminator 2564..2611
/vntifkey="43"
/label=T7_TERM
promoter 1931..1947
/vntifkey="30"
/label=T7\Promoter
protein_bind 1952..1972
/vntifkey="31"
/label=lac\Operator
promoter 1986..2099
/vntifkey="29"
/label=p10\promoter\+\5'\UTR
misc_feature 2213..2227
/vntifkey="21"
/label=C-Term\Ek/LIC\overhang
protein_bind 2153..2167
/vntifkey="31"
/label=Ek\site
protein_bind 2123..2146
/vntifkey="31"
/label=Strep-Tag\II
misc_binding 2237..2266
/vntifkey="20"
/label=10x\His-Tag
primer 2147..2230
/vntifkey="27"
/label=S-EkLIC\MCS
primer complement(2153..2236)
/vntifkey="27"
/label=AS-EkLIC\MCS
primer 2113..2146
/vntifkey="27"
/label=S-NTerm\Strep
primer complement(2117..2152)
/vntifkey="27"
/label=AS-NTerm\Strep
primer 2231..2279
/vntifkey="27"
/label=S-CTerm\10xHis
BASE COUNT 1332 a 1136 c 1122 g 1471 t
ORIGIN
1 tcctgcatct tttaatcaaa tcccaagatg tgtataaacg cgccggtatg tacaggaaga
61 ggtttatact aaactgttac attgcaaacg tggtttcgtg tgccaagtgt gaaaaccgat
121 gtttaatcaa ggctctgacg catttctaca accacgactc caagtgtgtg ggtgaagtca
181 tgcatctttt aatcaaatcc caagatgtgt ataaaccacc aaactgccaa aaaatgaaaa
241 ctgtcgacaa gctctgtccg tttgctggca actgcaaggg tctcaatcct atttgtaatt
301 attgaataat aaaacaatta taaatgtcaa atttgttttt tattaacgat acaaaccaaa
361 cgcaacaaga acatttgtag tattatctat aattgaaaac gcgtagttat aatcgctgag
421 gtaatattta aaatcatttt caaatgattc acagttaatt tgcgacaata taattttatt
481 ttcacataaa ctagacgcct tgtcgtcttc ttcttcgtat tccttctctt tttcattttt
541 ctcttcataa aaattaacat agttattatc gtatccatat atgtatctat cgtatagagt
601 aaattttttg ttgtcataaa tatatatgtc ttttttaatg gggtgtatag taccgctgcg
661 catagttttt ctgtaattta caacagtgct attttctggt agttcttcgg agtgtgttgc
721 tttaattatt aaatttatat aatcaatgaa tttgggatcg tcggttttgt acaatatgtt
781 gccggcatag tacgcagctt cttctagttc aattacacca ttttttagca gcaccggatt
841 aacataactt tccaaaatgt tgtacgaacc gttaaacaaa aacagttcac ctcccttttc
901 tatactattg tctgcgagca gttgtttgtt gttaaaaata acagccattg taatgagacg
961 cacaaactaa tatcacaaac tggaaatgtc tatcaatata tagttgctga tggccggcct
1021 attaatagta atcaattacg gggtcattag ttcatagccc atatatggag ttccgcgtta
1081 cataacttac ggtaaatggc ccgcctggct gaccgcccaa cgacccccgc ccattgacgt
1141 caataatgac gtatgttccc atagtaacgc caatagggac tttccattga cgtcaatggg
1201 tggagtattt acggtaaact gcccacttgg cagtacatca agtgtatcat atgccaagtc
1261 cgccccctat tgacgtcaat gacggtaaat ggcccgcctg gcattatgcc cagtacatga
1321 ccttacggga ctttcctact tggcagtaca tctacgtatt agtcatcgct attaccatgc
1381 tgatgcggtt ttggcagtac accaatgggc gtggatagcg gtttgactca cggggatttc
1441 caagtctcca ccccattgac gtcaatggga gtttgttttg gcaccaaaat caacgggact
1501 ttccaaaatg tcgtaataac cccgccccgt tgacgcaaat gggcggtagg cgtgtacggt
1561 gggaggtcta tataagcaga cgtcgtttag tgaaccgtca gatcactaga tgctttattg
1621 cggtagttta tcacagttaa attgctaacg ccagtctcga acttaacgtg cagaagttgg
1681 tcgtgaggca ctgggcaggt aagtatcggg ccctttgtgc ggggggagcg gctcggggct
1741 gtccgcgggg ggacggctgc cttcgggggg gacggggcag ggcggggttc ggcttctggc
1801 gtgtgaccgg cggctctaga gcctctgcta accatgttca tgccttcttc tttttcctac
1861 agctcctggg caacgtgctg gttattgtgc tgtctcatca ttttggcaaa gaattggatc
1921 ggaccgaaat taatacgact cactataggg gaattgtgag cggataacaa ttccccggag
1981 ttaatccggg acctttaatt caacccaaca caatatatta tagttaaata agaattatta
2041 tcaaatcatt tgtatattaa ttaaaatact atactgtaaa ttacatttta tttacaatca
2101 aaggagatat accatggcaa gctggagcca cccgcagttc gaaaagggtg cagatgacga
2161 cgacaaggta ccggatccga cgtcggtcga caagcttgcg gccgcaggag ctccgggctt
2221 ctcctcaatt tccgctcatc accaccatca tcaccatcac caccactaag tgattaacct
2281 caggtgcagg ctgcctatca gaaggtggtg gctggtgtgg ccaatgccct ggctcacaaa
2341 taccactgag atcgatcttt ttccctctgc caaaaattat ggggacatca tgaagcccct
2401 tgagcatctg acttctggct aataaaggaa atttattttc attgcaatag tgtgttggaa
2461 ttttttgtgt ctctcactcg gaaggacata tgggagggca aatcatttaa aacatcagaa
2521 tgagtatttg gtttagagtt tggcaacata tgcccatatg taactagcat aaccccttgg
2581 ggcctctaaa cgggtcttga ggggtttttt gctgaaagca tgcggaggaa attctccttg
2641 aagtttccct ggtgttcaaa gtaaaggagt ttgcaccaga cgcacctctg ttcactggtc
2701 cggcgtatta aaacacgata cattgttatt agtacattta ttaagcgcta gattctgtgc
2761 gttgttgatt tacagacaat tgttgtacgt attttaataa ttcattaaat ttataatctt
2821 tagggtggta tgttagagcg aaaatcaaat gattttcagc gtctttatat ctgaatttaa
2881 atattaaatc ctcaatagat ttgtaaaata ggtttcgatt agtttcaaac aagggttgtt
2941 tttccgaacc gatggctgga ctatctaatg gattttcgct caacgccaca aaacttgcca
3001 aatcttgtag cagcaatcta gctttgtcga tattcgtttg tgttttgttt tgtaataaag
3061 gttcgacgtc gttcaaaata ttatgcgctt ttgtatttct ttcatcactg tcgttagtgt
3121 acaattgact cgacgtaaac acgttaaata gagcttggac atatttaaca tcgggcgtgt
3181 tagctttatt aggccgatta tcgtcgtcgt cccaaccctc gtcgttagaa gttgcttccg
3241 aagacgattt tgccatagcc acacgacgcc tattaattgt gtcggctaac acgtccgcga
3301 tcaaatttgt agttgagctt tttggaattg cgatcgcata acttcgtata gcatacatta
3361 tacgaagtta taagctcgga acgctgcgct cggtcgttcg gctgcggcga gcggtatcag
3421 ctcactcaaa ggcggtaata cggttatcca cagaatcagg ggataacgca ggaaagaaca
3481 tgtgagcaaa aggccagcaa aaggccagga accgtaaaaa ggccgcgttg ctggcgtttt
3541 tccataggct ccgccccctg acgagcatca caaaaatcga cgctcaagtc agaggtggcg
3601 aaacccgaca ggactataaa gataccaggc gtttccccct ggaagctccc tcgtgcgctc
3661 tcctgttccg accctgccgc ttaccggata cctgtccgcc tttctccctt cgggaagcgt
3721 ggcgctttct caatgctcac gctgtaggta tctcagttcg gtgtaggtcg ttcgctccaa
3781 gctgggctgt gtgcacgaac cccccgttca gcccgaccgc tgcgccttat ccggtaacta
3841 tcgtcttgag tccaacccgg taagacacga cttatcgcca ctggcagcag ccactggtaa
3901 caggattagc agagcgaggt atgtaggcgg tgctacagag ttcttgaagt ggtggcctaa
3961 ctacggctac actagaagaa cagtatttgg tatctgcgct ctgctgaagc cagttacctt
4021 cggaaaaaga gttggtagct cttgatccgg caaacaaacc accgctggta gcggtggttt
4081 ttttgtttgc aagcagcaga ttacgcgcag aaaaaaagga tctcaagaag atcctttgtt
4141 accaatgctt aatcagtgag gcacctatct cagcgatctg tctatttcgt tcatccatag
4201 ttgcctgact ccccgtcgtg tagataacta cgatacggga gggcttacca tctggcccca
4261 gtgctgcaat gataccgcga gacccacgct caccggctcc agatttatca gcaataaacc
4321 agccagccgg aagggccgag cgcagaagtg gtcctgcaac tttatccgcc tccatccagt
4381 ctattaattg ttgccgggaa gctagagtaa gtagttcgcc agttaatagt ttgcgcaacg
4441 ttgttgccat tgctacaggc atcgtggtgt cacgctcgtc gtttggtatg gcttcattca
4501 gctccggttc ccaacgatca aggcgagtta catgatcccc catgttgtgc aaaaaagcgg
4561 ttagctcctt cggtcctccg atcgttgtca gaagtaagtt ggccgcagtg ttatcactca
4621 tggttatggc agcactgcat aattctctta ctgtcatgcc atccgtaaga tgcttttctg
4681 tgactggtga gtactcaacc aagtcattct gagaatagtg tatgcggcga ccgagttgct
4741 cttgcccggc gtcaatacgg gataataccg cgccacatag cagaacttta aaagtgctca
4801 tcattggaaa acgttcttcg gggcgaaaac tctcaaggat cttaccgctg ttgagatcca
4861 gttcgatgta acccactcgt gcacccaact gatcttcagc atcttttact ttcaccagcg
4921 tttctgggtg agcaaaaaca ggaaggcaaa atgccgcaaa aaagggaata agggcgacac
4981 ggaaatgttg aatactcata ctcttccttt ttcaatatta ttgaagcatt tatcagggtt
5041 attgtctcat gtccgcgcgt t
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